Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm25569-201ENSMUST00000157175 131 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm28195-201ENSMUST00000186992 372 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm2448-201ENSMUST00000207080 559 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm9791-201ENSMUST00000060997 447 ntBASIC12.04□□□□□ -0.48
Clp1Q99LI9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clp1Q99LI9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm13204-201ENSMUST00000120110 821 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm15136-201ENSMUST00000120552 533 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Mir432-201ENSMUST00000157230 75 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm11942-201ENSMUST00000180255 345 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm9625-201ENSMUST00000180422 955 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm26782-203ENSMUST00000227103 751 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clp1Q99LI9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.02□□□□□ -0.48
Clp1Q99LI9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clp1Q99LI9 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm16459-201ENSMUST00000121443 686 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms