Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdhb18Q91Y02 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm16219-201ENSMUST00000120096 274 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm13022-201ENSMUST00000121181 285 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm43380-201ENSMUST00000200421 220 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdhb18Q91Y02 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm11980-201ENSMUST00000121445 986 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm22379-201ENSMUST00000157480 131 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm37284-201ENSMUST00000193607 539 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm43163-201ENSMUST00000196571 442 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Gm30671-201ENSMUST00000214898 318 ntBASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb18Q91Y02 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms