Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Capsl-202ENSMUST00000226688 739 ntBASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb5Q91XZ5 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm6158-201ENSMUST00000109467 904 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm14165-201ENSMUST00000121456 952 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm17221-201ENSMUST00000163909 481 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm17073-201ENSMUST00000168069 556 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm43778-201ENSMUST00000199438 199 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb5Q91XZ5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gm25562-201ENSMUST00000104608 133 ntBASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gm20392-201ENSMUST00000173047 701 ntBASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb5Q91XZ5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms