Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh18Q8VHR0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm14644-201ENSMUST00000116671 647 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm2991-201ENSMUST00000173338 480 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Mir6420-201ENSMUST00000185032 102 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.01□□□□□ -0.65
Pcdh18Q8VHR0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm23270-201ENSMUST00000104055 131 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm5940-201ENSMUST00000117582 1068 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm14726-201ENSMUST00000120623 896 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm6621-201ENSMUST00000193251 772 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm9136-201ENSMUST00000193368 454 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms