Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm3329-201ENSMUST00000159873 556 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm5599-201ENSMUST00000209602 788 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gm18514-201ENSMUST00000218980 436 ntBASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx39aQ8VDW0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm25554-201ENSMUST00000158075 113 ntBASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm23218-201ENSMUST00000158124 276 ntBASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm35960-201ENSMUST00000202712 767 ntBASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx39aQ8VDW0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm12218-201ENSMUST00000117666 399 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx39aQ8VDW0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms