Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm23270-201ENSMUST00000104055 131 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm29396-201ENSMUST00000185659 716 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm4857-201ENSMUST00000192718 785 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm10608-202ENSMUST00000213924 676 ntBASIC9.24□□□□□ -0.93
Nup35Q8R4R6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup35Q8R4R6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm15370-201ENSMUST00000117158 253 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm5187-201ENSMUST00000117317 991 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm11222-201ENSMUST00000119005 738 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm7150-201ENSMUST00000122032 981 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm20495-201ENSMUST00000173902 235 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Gm32999-201ENSMUST00000192693 562 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.23□□□□□ -0.93
Nup35Q8R4R6 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup35Q8R4R6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms