Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm22042-201ENSMUST00000082989 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm26110-201ENSMUST00000083971 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm38314-201ENSMUST00000195709 625 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm45224-201ENSMUST00000208203 414 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm6082-201ENSMUST00000215204 454 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afjQ8R1M2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
H2afjQ8R1M2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 158.7 ms