Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm37688-201ENSMUST00000195195 465 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm43106-201ENSMUST00000199485 637 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 AC107711.4-201ENSMUST00000228948 440 ntBASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ddx54Q8K4L0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm8464-202ENSMUST00000146697 1142 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm4750-201ENSMUST00000151942 1142 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm16165-201ENSMUST00000160140 795 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Mir8091-201ENSMUST00000183602 139 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm43930-201ENSMUST00000203868 845 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm45893-201ENSMUST00000211899 247 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 AC116797.2-202ENSMUST00000223587 1017 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 CT030035.1-201ENSMUST00000223964 935 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ddx54Q8K4L0 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm7701-201ENSMUST00000163185 1479 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm15636-201ENSMUST00000119205 668 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm5526-201ENSMUST00000153604 423 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 AC140314.1-201ENSMUST00000219549 554 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 AC102523.1-201ENSMUST00000228706 1144 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Mir341-201ENSMUST00000093593 96 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms