Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Clip4Q8CI96 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm12165-201ENSMUST00000117047 342 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm13611-201ENSMUST00000118269 318 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm13045-201ENSMUST00000119019 712 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm8199-201ENSMUST00000121323 823 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm19353-201ENSMUST00000184561 445 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm37986-201ENSMUST00000193285 383 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm43002-201ENSMUST00000200310 155 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm42997-202ENSMUST00000200321 985 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm9555-201ENSMUST00000200908 583 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Gm45575-201ENSMUST00000210283 548 ntBASIC11.47□□□□□ -0.57
Clip4Q8CI96 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clip4Q8CI96 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.46□□□□□ -0.57
Clip4Q8CI96 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm15207-201ENSMUST00000119259 442 ntBASIC11.46□□□□□ -0.57
Clip4Q8CI96 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm44100-201ENSMUST00000204329 436 ntBASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Ntng1-201ENSMUST00000051253 327 ntBASIC11.46□□□□□ -0.57
Clip4Q8CI96 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms