Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Mir8093-201ENSMUST00000185043 137 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28937-201ENSMUST00000185413 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm29400-201ENSMUST00000187208 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28662-201ENSMUST00000188446 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28251-201ENSMUST00000188835 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm37318-201ENSMUST00000194325 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm38017-201ENSMUST00000194768 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm37287-201ENSMUST00000195449 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm37793-201ENSMUST00000195548 695 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5982-201ENSMUST00000196234 512 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm6450-201ENSMUST00000200896 574 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm19187-201ENSMUST00000206781 892 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5455-201ENSMUST00000058710 715 ntBASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm26286-201ENSMUST00000104166 134 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm32111-201ENSMUST00000207689 846 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm7046-201ENSMUST00000221351 977 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc28bQ8CEG5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms