Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam43aQ8BUP8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm14644-201ENSMUST00000116671 647 ntBASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm7722-201ENSMUST00000120646 741 ntBASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam43aQ8BUP8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm25890-201ENSMUST00000177643 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm22614-201ENSMUST00000178300 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm22042-201ENSMUST00000082989 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Gm26110-201ENSMUST00000083971 165 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.78□□□□□ -0.36
Fam43aQ8BUP8 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms