Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm7666-201ENSMUST00000146631 819 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm18367-201ENSMUST00000176139 600 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm18753-201ENSMUST00000201000 566 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm6722-201ENSMUST00000221586 390 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.09□□□□□ -0.63
Trim50Q810I2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim50Q810I2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm9062-201ENSMUST00000117712 727 ntBASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim50Q810I2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trim50Q810I2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim50Q810I2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim50Q810I2 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.07□□□□□ -0.64
Trim50Q810I2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim50Q810I2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim50Q810I2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim50Q810I2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim50Q810I2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim50Q810I2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms