Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc88cQ6VGS5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm22379-201ENSMUST00000157480 131 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm9673-201ENSMUST00000119287 781 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm13117-201ENSMUST00000120894 691 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm16380-201ENSMUST00000077997 478 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc88cQ6VGS5 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm25072-201ENSMUST00000175233 235 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm19927-201ENSMUST00000185792 781 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm43671-201ENSMUST00000200422 433 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Id2-203ENSMUST00000222667 958 ntBASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms