Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm23675-201ENSMUST00000157311 125 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm27956-201ENSMUST00000175604 260 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm9625-201ENSMUST00000180422 955 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm6606-201ENSMUST00000193613 947 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm31274-201ENSMUST00000197356 229 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm43854-201ENSMUST00000200418 394 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm44008-201ENSMUST00000204345 412 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm45527-201ENSMUST00000211052 774 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm5449-201ENSMUST00000081132 357 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Snrnp40Q6PE01 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Snrnp40Q6PE01 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Mir181d-201ENSMUST00000102383 72 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Olfml3-204ENSMUST00000169286 874 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm26119-201ENSMUST00000175601 104 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm6478-201ENSMUST00000099450 742 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms