Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rnf220Q6PDX6 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Mir1247-201ENSMUST00000116706 82 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm13226-201ENSMUST00000117838 404 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm13570-201ENSMUST00000140763 309 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm42937-201ENSMUST00000197360 752 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.76□□□□□ -0.69
Rnf220Q6PDX6 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms