Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Snord17-201ENSMUST00000104526 238 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Gm8111-201ENSMUST00000117659 987 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Gm11956-201ENSMUST00000119525 512 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Gm20426-201ENSMUST00000173657 440 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Mir7686-201ENSMUST00000200604 57 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Usp49Q6P9L4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Mir8115-201ENSMUST00000184992 119 ntBASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.71□□□□□ -0.37
Usp49Q6P9L4 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Usp49Q6P9L4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.71□□□□□ -0.37
Usp49Q6P9L4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Usp49Q6P9L4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm4294-201ENSMUST00000105169 614 ntBASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm12218-201ENSMUST00000117666 399 ntBASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Mir7032-201ENSMUST00000185154 79 ntBASIC12.7□□□□□ -0.38
Usp49Q6P9L4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms