Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm17435-202ENSMUST00000212699 1998 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm14497-201ENSMUST00000119537 580 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Mir3100-201ENSMUST00000174918 65 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm44323-201ENSMUST00000198689 129 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm16030-201ENSMUST00000159098 603 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm4982-201ENSMUST00000160440 1098 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 AC154461.1-201ENSMUST00000224207 1005 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 AC159006.3-201ENSMUST00000226918 664 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Mir6359-201ENSMUST00000183668 81 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm5191-201ENSMUST00000222882 1236 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm4953-201ENSMUST00000077309 483 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm16228-201ENSMUST00000162286 809 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm19246-201ENSMUST00000173599 255 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Mir7011-201ENSMUST00000183768 73 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm44658-201ENSMUST00000207965 637 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Gm18035-201ENSMUST00000211962 589 ntBASIC8.66□□□□□ -1.02
NipblQ6KCD5 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms