Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm6304-201ENSMUST00000096579 447 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Scn9aQ62205 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scn9aQ62205 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm2474-201ENSMUST00000195162 559 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Gm5650-201ENSMUST00000209641 598 ntBASIC13.18□□□□□ -0.3
Scn9aQ62205 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn9aQ62205 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn9aQ62205 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.17□□□□□ -0.3
Scn9aQ62205 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Scn9aQ62205 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn9aQ62205 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn9aQ62205 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm14176-201ENSMUST00000121302 477 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm26957-201ENSMUST00000182645 977 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm38349-201ENSMUST00000195732 462 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm3527-201ENSMUST00000198905 460 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm9619-201ENSMUST00000211587 762 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm29689-201ENSMUST00000221076 589 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.16□□□□□ -0.3
Scn9aQ62205 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms