Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm43433-201ENSMUST00000196573 481 ntBASIC10.86□□□□□ -0.67
Nr1h4Q60641 Gm44651-201ENSMUST00000207343 372 ntBASIC10.86□□□□□ -0.67
Nr1h4Q60641 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.86□□□□□ -0.67
Nr1h4Q60641 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.86□□□□□ -0.67
Nr1h4Q60641 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nr1h4Q60641 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.85□□□□□ -0.67
Nr1h4Q60641 Gm14071-201ENSMUST00000117817 509 ntBASIC10.85□□□□□ -0.67
Nr1h4Q60641 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Gm4157-201ENSMUST00000211647 679 ntBASIC10.85□□□□□ -0.67
Nr1h4Q60641 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Gm7940-201ENSMUST00000218195 769 ntBASIC10.85□□□□□ -0.67
Nr1h4Q60641 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nr1h4Q60641 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms