Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm24398-201ENSMUST00000157870 109 ntBASIC13.62□□□□□ -0.23
Vps54Q5SPW0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm8197-202ENSMUST00000193422 934 ntBASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Mt1-202ENSMUST00000211807 1085 ntBASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gm30671-201ENSMUST00000214898 318 ntBASIC13.62□□□□□ -0.23
Vps54Q5SPW0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vps54Q5SPW0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm12516-201ENSMUST00000120819 385 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm13182-201ENSMUST00000122241 312 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Mir7032-201ENSMUST00000185154 79 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm34023-201ENSMUST00000195539 217 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm5599-201ENSMUST00000209602 788 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps54Q5SPW0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.6□□□□□ -0.23
Vps54Q5SPW0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm30946-201ENSMUST00000198288 724 ntBASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps54Q5SPW0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms