Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Mt1-202ENSMUST00000211807 1085 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm10169-201ENSMUST00000121822 348 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm14126-201ENSMUST00000122345 395 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm22993-201ENSMUST00000175423 254 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm29013-201ENSMUST00000187431 237 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm43966-201ENSMUST00000203301 612 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm10254-201ENSMUST00000052888 867 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rc3h1Q4VGL6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm6407-201ENSMUST00000176468 549 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm16380-201ENSMUST00000077997 478 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms