Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Znf48Q3US17 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm18300-201ENSMUST00000192792 1406 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm11877-201ENSMUST00000118921 852 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm12029-201ENSMUST00000120073 832 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm11450-201ENSMUST00000121144 333 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm24845-201ENSMUST00000158034 109 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm43491-201ENSMUST00000197133 784 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm45598-202ENSMUST00000210719 986 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.74□□□□□ -0.85
Znf48Q3US17 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.74□□□□□ -0.85
Znf48Q3US17 AC159293.2-201ENSMUST00000222289 424 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 AC121567.1-201ENSMUST00000227213 842 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm44090-201ENSMUST00000204669 1834 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm43341-201ENSMUST00000200104 1308 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.74□□□□□ -0.85
Znf48Q3US17 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Znf48Q3US17 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Znf48Q3US17 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms