Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col9a2Q07643 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col9a2Q07643 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col9a2Q07643 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.3□□□□□ -0.44
Col9a2Q07643 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col9a2Q07643 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm11619-201ENSMUST00000117474 237 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm6630-201ENSMUST00000119199 454 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm24248-201ENSMUST00000157321 322 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm9135-201ENSMUST00000182963 990 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.3□□□□□ -0.44
Col9a2Q07643 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.3□□□□□ -0.44
Col9a2Q07643 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col9a2Q07643 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.29□□□□□ -0.44
Col9a2Q07643 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm7541-201ENSMUST00000118361 535 ntBASIC12.29□□□□□ -0.44
Col9a2Q07643 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm37365-201ENSMUST00000193109 409 ntBASIC12.29□□□□□ -0.44
Col9a2Q07643 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.29□□□□□ -0.44
Col9a2Q07643 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.29□□□□□ -0.44
Col9a2Q07643 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col9a2Q07643 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms