Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.52□□□□□ -0.41
Lig3P97386 Gm12948-201ENSMUST00000119406 682 ntBASIC12.52□□□□□ -0.41
Lig3P97386 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lig3P97386 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.52□□□□□ -0.41
Lig3P97386 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Mir6923-201ENSMUST00000184592 72 ntBASIC12.52□□□□□ -0.41
Lig3P97386 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.52□□□□□ -0.41
Lig3P97386 Gm19009-201ENSMUST00000223072 823 ntBASIC12.52□□□□□ -0.41
Lig3P97386 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.52□□□□□ -0.41
Lig3P97386 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Lig3P97386 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lig3P97386 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lig3P97386 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Lig3P97386 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Lig3P97386 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Mir8115-201ENSMUST00000184992 119 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm28686-201ENSMUST00000187404 609 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.51□□□□□ -0.41
Lig3P97386 Gm43186-201ENSMUST00000198130 824 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm42779-201ENSMUST00000198807 406 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Gm44882-201ENSMUST00000205702 802 ntBASIC12.51□□□□□ -0.41
Lig3P97386 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lig3P97386 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lig3P97386 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Lig3P97386 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lig3P97386 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.51□□□□□ -0.41
Lig3P97386 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lig3P97386 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lig3P97386 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lig3P97386 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Gm26013-201ENSMUST00000104404 119 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm13916-201ENSMUST00000117368 628 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Gm11663-201ENSMUST00000117888 290 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms