Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
SgcaP82350 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SgcaP82350 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SgcaP82350 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SgcaP82350 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.53□□□□□ -0.88
SgcaP82350 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Gm6439-201ENSMUST00000199849 862 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SgcaP82350 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SgcaP82350 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.53□□□□□ -0.88
SgcaP82350 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
SgcaP82350 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
SgcaP82350 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SgcaP82350 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
SgcaP82350 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.52□□□□□ -0.88
SgcaP82350 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
SgcaP82350 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SgcaP82350 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SgcaP82350 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SgcaP82350 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
SgcaP82350 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms