Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm43916-201ENSMUST00000205062 967 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.22□□□□□ -0.77
SgcbP82349 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.22□□□□□ -0.77
SgcbP82349 Gm8679-201ENSMUST00000210651 1036 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.22□□□□□ -0.77
SgcbP82349 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.22□□□□□ -0.77
SgcbP82349 AC125539.1-202ENSMUST00000226449 670 ntBASIC10.22□□□□□ -0.77
SgcbP82349 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
SgcbP82349 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SgcbP82349 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.21□□□□□ -0.77
SgcbP82349 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SgcbP82349 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Gm11893-201ENSMUST00000117829 491 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Gm16420-201ENSMUST00000120258 856 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Gm5996-201ENSMUST00000211110 718 ntBASIC10.21□□□□□ -0.77
SgcbP82349 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SgcbP82349 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SgcbP82349 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
SgcbP82349 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
SgcbP82349 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.21□□□□□ -0.78
SgcbP82349 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.21□□□□□ -0.78
SgcbP82349 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
SgcbP82349 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
SgcbP82349 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
SgcbP82349 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SgcbP82349 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.2□□□□□ -0.78
SgcbP82349 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms