Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Otx1P80205 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Otx1P80205 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm4294-201ENSMUST00000105169 614 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm12463-201ENSMUST00000118271 849 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm13408-201ENSMUST00000119822 798 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm13935-201ENSMUST00000121859 798 ntBASIC9.84□□□□□ -0.83
Otx1P80205 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm7666-201ENSMUST00000146631 819 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Otx1P80205 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.84□□□□□ -0.83
Otx1P80205 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Otx1P80205 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Otx1P80205 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.84□□□□□ -0.83
Otx1P80205 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.84□□□□□ -0.83
Otx1P80205 Gm10774-201ENSMUST00000188689 204 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm6439-201ENSMUST00000199849 862 ntBASIC9.84□□□□□ -0.83
Otx1P80205 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.84□□□□□ -0.83
Otx1P80205 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Otx1P80205 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Otx1P80205 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Otx1P80205 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Otx1P80205 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.84□□□□□ -0.83
Otx1P80205 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Otx1P80205 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm13045-201ENSMUST00000119019 712 ntBASIC9.83□□□□□ -0.84
Otx1P80205 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Otx1P80205 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm19353-201ENSMUST00000184561 445 ntBASIC9.83□□□□□ -0.84
Otx1P80205 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.83□□□□□ -0.84
Otx1P80205 Gm42867-201ENSMUST00000202995 469 ntBASIC9.83□□□□□ -0.84
Otx1P80205 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.83□□□□□ -0.84
Otx1P80205 Gm5051-201ENSMUST00000204085 485 ntBASIC9.83□□□□□ -0.84
Otx1P80205 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.83□□□□□ -0.84
Otx1P80205 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms