Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CiitaP79621 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.33□□□□□ -0.44
CiitaP79621 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
CiitaP79621 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CiitaP79621 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Gm10169-201ENSMUST00000121822 348 ntBASIC12.33□□□□□ -0.44
CiitaP79621 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CiitaP79621 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Gm8492-201ENSMUST00000182375 987 ntBASIC12.33□□□□□ -0.44
CiitaP79621 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.33□□□□□ -0.44
CiitaP79621 Gm9353-201ENSMUST00000200472 604 ntBASIC12.33□□□□□ -0.44
CiitaP79621 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.33□□□□□ -0.44
CiitaP79621 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Gm3619-201ENSMUST00000219947 775 ntBASIC12.33□□□□□ -0.44
CiitaP79621 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.33□□□□□ -0.44
CiitaP79621 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.33□□□□□ -0.44
CiitaP79621 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CiitaP79621 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.32□□□□□ -0.44
CiitaP79621 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CiitaP79621 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.32□□□□□ -0.44
CiitaP79621 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Gm12791-201ENSMUST00000120788 655 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Gm43058-201ENSMUST00000197645 625 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.32□□□□□ -0.44
CiitaP79621 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CiitaP79621 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CiitaP79621 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.31□□□□□ -0.44
CiitaP79621 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Gm25063-201ENSMUST00000104666 94 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CiitaP79621 Gm12274-201ENSMUST00000120062 385 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms