Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smad1P70340 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.74□□□□□ -0.53
Smad1P70340 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smad1P70340 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.74□□□□□ -0.53
Smad1P70340 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.74□□□□□ -0.53
Smad1P70340 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.74□□□□□ -0.53
Smad1P70340 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.74□□□□□ -0.53
Smad1P70340 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.74□□□□□ -0.53
Smad1P70340 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smad1P70340 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.73□□□□□ -0.53
Smad1P70340 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.73□□□□□ -0.53
Smad1P70340 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.73□□□□□ -0.53
Smad1P70340 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.73□□□□□ -0.53
Smad1P70340 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Gm5733-201ENSMUST00000190232 939 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Gm38210-201ENSMUST00000191944 809 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smad1P70340 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Gm9797-202ENSMUST00000218003 294 ntBASIC11.73□□□□□ -0.53
Smad1P70340 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Smad1P70340 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smad1P70340 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smad1P70340 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.73□□□□□ -0.53
Smad1P70340 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smad1P70340 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smad1P70340 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smad1P70340 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.72□□□□□ -0.53
Smad1P70340 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Gm23596-201ENSMUST00000104304 132 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Gm24891-201ENSMUST00000104391 136 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Smad1P70340 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.72□□□□□ -0.53
Smad1P70340 Gm11675-201ENSMUST00000121873 832 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Gm23085-201ENSMUST00000157849 293 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.72□□□□□ -0.53
Smad1P70340 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smad1P70340 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.72□□□□□ -0.53
Smad1P70340 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smad1P70340 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.72□□□□□ -0.53
Smad1P70340 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Gm45398-201ENSMUST00000210561 165 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.72□□□□□ -0.53
Smad1P70340 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Gm10254-201ENSMUST00000052888 867 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smad1P70340 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.72□□□□□ -0.53
Smad1P70340 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms