Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm14071-201ENSMUST00000117817 509 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm13996-201ENSMUST00000118456 430 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.28□□□□□ -0.6
Traf6P70196 Gm12380-201ENSMUST00000119012 544 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm14017-201ENSMUST00000121934 386 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Traf6P70196 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.28□□□□□ -0.6
Traf6P70196 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.28□□□□□ -0.6
Traf6P70196 AY036118-201ENSMUST00000200021 923 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm5363-201ENSMUST00000211927 938 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Gm18065-201ENSMUST00000221395 526 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.28□□□□□ -0.6
Traf6P70196 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Traf6P70196 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Traf6P70196 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Traf6P70196 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Traf6P70196 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.28□□□□□ -0.6
Traf6P70196 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Traf6P70196 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Traf6P70196 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Traf6P70196 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Traf6P70196 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Traf6P70196 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.27□□□□□ -0.6
Traf6P70196 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Traf6P70196 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Traf6P70196 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Traf6P70196 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Traf6P70196 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Traf6P70196 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Gm24749-201ENSMUST00000157838 343 ntBASIC11.27□□□□□ -0.61
Traf6P70196 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Traf6P70196 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.27□□□□□ -0.61
Traf6P70196 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Gm45113-201ENSMUST00000207518 165 ntBASIC11.27□□□□□ -0.61
Traf6P70196 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.27□□□□□ -0.61
Traf6P70196 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Traf6P70196 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Traf6P70196 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.26□□□□□ -0.61
Traf6P70196 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Traf6P70196 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Traf6P70196 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Traf6P70196 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Traf6P70196 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms