Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 AC160405.2-201ENSMUST00000219008 1987 ntBASIC6.46□□□□□ -1.38
Rps28P62858 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm6831-202ENSMUST00000213025 1673 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Rps28P62858 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm16045-201ENSMUST00000123882 2969 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm37069-201ENSMUST00000192742 4142 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 AC164437.4-204ENSMUST00000227169 4024 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Stam2-201ENSMUST00000102759 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Rps28P62858 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC6.45□□□□□ -1.38
Rps28P62858 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC6.45□□□□□ -1.38
Rps28P62858 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm11189-201ENSMUST00000117979 375 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Gm11700-201ENSMUST00000119409 403 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC6.45□□□□□ -1.38
Rps28P62858 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC6.45□□□□□ -1.38
Rps28P62858 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 AC127349.1-201ENSMUST00000224590 266 ntBASIC6.45□□□□□ -1.38
Rps28P62858 AC134335.2-201ENSMUST00000227660 440 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Rps28P62858 BC025920-204ENSMUST00000121138 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Zfp62-203ENSMUST00000109198 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Gm9864-201ENSMUST00000090043 1656 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC6.45□□□□□ -1.38
Rps28P62858 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Rps28P62858 AC153940.1-201ENSMUST00000220149 5300 ntBASIC6.45□□□□□ -1.38
Rps28P62858 Trpc4-205ENSMUST00000200048 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Rps28P62858 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Rps28P62858 Gm12846-201ENSMUST00000120431 1373 ntBASIC6.44□□□□□ -1.38
Rps28P62858 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Rps28P62858 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rps28P62858 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
Rps28P62858 Gapdhs-201ENSMUST00000074758 1368 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Rps28P62858 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rps28P62858 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rps28P62858 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rps28P62858 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Rps28P62858 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms