Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp46P62069 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp46P62069 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp46P62069 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp46P62069 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp46P62069 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Usp46P62069 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Usp46P62069 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.21□□□□□ -0.46
Usp46P62069 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp46P62069 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm11949-201ENSMUST00000117640 372 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.2□□□□□ -0.46
Usp46P62069 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Gm8459-201ENSMUST00000162504 760 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm3150-201ENSMUST00000166418 204 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.2□□□□□ -0.46
Usp46P62069 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm8641-201ENSMUST00000186995 826 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.2□□□□□ -0.46
Usp46P62069 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp46P62069 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.2□□□□□ -0.46
Usp46P62069 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.2□□□□□ -0.46
Usp46P62069 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Usp46P62069 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp46P62069 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp46P62069 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp46P62069 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp46P62069 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Usp46P62069 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.19□□□□□ -0.46
Usp46P62069 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Usp46P62069 Gm16166-201ENSMUST00000118291 787 ntBASIC12.19□□□□□ -0.46
Usp46P62069 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Usp46P62069 Gm8215-201ENSMUST00000120627 990 ntBASIC12.19□□□□□ -0.46
Usp46P62069 Gm11836-201ENSMUST00000121022 441 ntBASIC12.19□□□□□ -0.46
Usp46P62069 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC12.19□□□□□ -0.46
Usp46P62069 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms