Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Gm24933-201ENSMUST00000103762 110 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Gm23252-201ENSMUST00000103776 110 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Gm22495-201ENSMUST00000104492 126 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.43□□□□□ -0.26
Lrch1P62046 Gm26443-201ENSMUST00000179610 110 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lrch1P62046 Ighv5-8-202ENSMUST00000191967 337 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Gm29808-201ENSMUST00000194419 468 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.43□□□□□ -0.26
Lrch1P62046 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lrch1P62046 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.43□□□□□ -0.26
Lrch1P62046 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Lrch1P62046 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Lrch1P62046 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lrch1P62046 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.42□□□□□ -0.26
Lrch1P62046 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.42□□□□□ -0.26
Lrch1P62046 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.42□□□□□ -0.26
Lrch1P62046 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Gm20493-201ENSMUST00000173706 213 ntBASIC13.42□□□□□ -0.26
Lrch1P62046 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.42□□□□□ -0.26
Lrch1P62046 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.42□□□□□ -0.26
Lrch1P62046 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lrch1P62046 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lrch1P62046 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Lrch1P62046 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lrch1P62046 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lrch1P62046 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.42□□□□□ -0.26
Lrch1P62046 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lrch1P62046 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.42□□□□□ -0.26
Lrch1P62046 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Lrch1P62046 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.41□□□□□ -0.26
Lrch1P62046 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.41□□□□□ -0.26
Lrch1P62046 Gm6758-201ENSMUST00000119643 1055 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm15815-201ENSMUST00000120569 255 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm19246-201ENSMUST00000173599 255 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm18733-202ENSMUST00000174447 401 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Mir6359-201ENSMUST00000183668 81 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.41□□□□□ -0.26
Lrch1P62046 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Lrch1P62046 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.41□□□□□ -0.26
Lrch1P62046 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.41□□□□□ -0.26
Lrch1P62046 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lrch1P62046 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lrch1P62046 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lrch1P62046 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lrch1P62046 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lrch1P62046 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms