Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Gm22937-201ENSMUST00000103954 131 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.27■□□□□ 0.04
Nphp4P59240 Gm15036-201ENSMUST00000118880 400 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nphp4P59240 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Gm9162-201ENSMUST00000182081 991 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 Gm37852-201ENSMUST00000193027 350 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Gm5302-201ENSMUST00000202130 796 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 Gm6352-201ENSMUST00000203583 1134 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 AC162932.1-201ENSMUST00000219209 872 ntBASIC15.27■□□□□ 0.04
Nphp4P59240 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nphp4P59240 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nphp4P59240 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nphp4P59240 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Nphp4P59240 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.27■□□□□ 0.03
Nphp4P59240 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC15.27■□□□□ 0.03
Nphp4P59240 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.27■□□□□ 0.03
Nphp4P59240 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nphp4P59240 Mir671-201ENSMUST00000102432 98 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Nphp4P59240 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm15136-201ENSMUST00000120552 533 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC15.26■□□□□ 0.03
Nphp4P59240 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm17889-201ENSMUST00000198410 598 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm8162-201ENSMUST00000213951 665 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm44740-201ENSMUST00000205603 1614 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nphp4P59240 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC15.26■□□□□ 0.03
Nphp4P59240 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm43482-201ENSMUST00000202797 1861 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Cog3-203ENSMUST00000227473 4197 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm35850-202ENSMUST00000211705 2120 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Gm7405-201ENSMUST00000121476 1337 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nphp4P59240 Ighv13-1-201ENSMUST00000103480 294 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Gm5621-201ENSMUST00000187303 640 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC15.26■□□□□ 0.03
Nphp4P59240 Gm18042-201ENSMUST00000219887 790 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Gm26782-203ENSMUST00000227103 751 ntBASIC15.26■□□□□ 0.03
Nphp4P59240 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nphp4P59240 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nphp4P59240 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Nphp4P59240 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.25■□□□□ 0.03
Nphp4P59240 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.25■□□□□ 0.03
Nphp4P59240 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC15.25■□□□□ 0.03
Nphp4P59240 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp4P59240 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms