Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.76□□□□□ -0.69
Nup43P59235 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nup43P59235 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.76□□□□□ -0.69
Nup43P59235 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.75□□□□□ -0.69
Nup43P59235 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.75□□□□□ -0.69
Nup43P59235 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.75□□□□□ -0.69
Nup43P59235 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Gm14585-201ENSMUST00000120713 634 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.75□□□□□ -0.69
Nup43P59235 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.75□□□□□ -0.69
Nup43P59235 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Olfml3-204ENSMUST00000169286 874 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Gm44315-201ENSMUST00000203041 219 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.75□□□□□ -0.69
Nup43P59235 Gm45118-201ENSMUST00000208928 825 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nup43P59235 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nup43P59235 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Nup43P59235 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nup43P59235 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.75□□□□□ -0.69
Nup43P59235 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup43P59235 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Nup43P59235 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nup43P59235 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nup43P59235 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Nup43P59235 Gm8111-201ENSMUST00000117659 987 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.74□□□□□ -0.69
Nup43P59235 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.74□□□□□ -0.69
Nup43P59235 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.74□□□□□ -0.69
Nup43P59235 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm37986-201ENSMUST00000193285 383 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm43916-201ENSMUST00000205062 967 ntBASIC10.74□□□□□ -0.69
Nup43P59235 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.74□□□□□ -0.69
Nup43P59235 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm5451-201ENSMUST00000080545 579 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm23105-201ENSMUST00000083719 134 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Btrc-209ENSMUST00000224478 2194 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms