Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm7857-201ENSMUST00000117957 358 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm15566-201ENSMUST00000121130 590 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Btrc-209ENSMUST00000224478 2194 ntBASIC11.61□□□□□ -0.55
Tubgcp3P58854 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tubgcp3P58854 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm13809-201ENSMUST00000117921 597 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm12217-201ENSMUST00000118858 696 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm15595-201ENSMUST00000120840 961 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm3150-201ENSMUST00000166418 204 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.6□□□□□ -0.55
Tubgcp3P58854 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tubgcp3P58854 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms