Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Gm42741-201ENSMUST00000201340 2278 ntBASIC8.82□□□□□ -1
Ctdsp1P58466 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ctdsp1P58466 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm37003-201ENSMUST00000194702 2827 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Ctdsp1P58466 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Gm19220-201ENSMUST00000222682 803 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.81□□□□□ -1
Ctdsp1P58466 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ctdsp1P58466 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm13437-201ENSMUST00000122434 1981 ntBASIC8.81□□□□□ -1
Ctdsp1P58466 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC8.81□□□□□ -1
Ctdsp1P58466 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ctdsp1P58466 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Fgf17-202ENSMUST00000227123 1336 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC8.8□□□□□ -1
Ctdsp1P58466 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Ctdsp1P58466 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm5419-201ENSMUST00000119301 527 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Gm13342-201ENSMUST00000121055 207 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC8.8□□□□□ -1
Ctdsp1P58466 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.8□□□□□ -1
Ctdsp1P58466 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms