Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Btrc-209ENSMUST00000224478 2194 ntBASIC11.37□□□□□ -0.59
Lim2P56563 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Rgr-203ENSMUST00000225070 4704 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Lim2P56563 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Gm15615-201ENSMUST00000118876 198 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Gm12176-201ENSMUST00000121420 875 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Gm15549-201ENSMUST00000121595 622 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.36□□□□□ -0.59
Lim2P56563 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Gm9645-201ENSMUST00000197131 792 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.36□□□□□ -0.59
Lim2P56563 Gm44008-201ENSMUST00000204345 412 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Gm17825-201ENSMUST00000206836 794 ntBASIC11.36□□□□□ -0.59
Lim2P56563 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.36□□□□□ -0.59
Lim2P56563 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.36□□□□□ -0.59
Lim2P56563 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lim2P56563 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.36□□□□□ -0.59
Lim2P56563 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lim2P56563 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lim2P56563 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lim2P56563 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Gm12029-201ENSMUST00000120073 832 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Gm11246-201ENSMUST00000120880 345 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Gm15329-201ENSMUST00000121408 155 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.35□□□□□ -0.59
Lim2P56563 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Gm6485-201ENSMUST00000160676 439 ntBASIC11.35□□□□□ -0.59
Lim2P56563 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Gm3508-201ENSMUST00000186012 792 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Gm44315-201ENSMUST00000203041 219 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.35□□□□□ -0.59
Lim2P56563 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lim2P56563 Gm44980-201ENSMUST00000205826 314 ntBASIC11.35□□□□□ -0.59
Lim2P56563 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.35□□□□□ -0.59
Lim2P56563 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms