Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm17040-202ENSMUST00000170597 889 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Fdft1P53798 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm16505-201ENSMUST00000179981 232 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Gm27341-201ENSMUST00000183570 106 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Gm28450-201ENSMUST00000187349 638 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm9257-201ENSMUST00000221254 232 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Fdft1P53798 Mir433-201ENSMUST00000093564 124 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Gm21811-201ENSMUST00000096485 930 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Fdft1P53798 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Fdft1P53798 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.36□□□□□ -0.59
Fdft1P53798 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Fdft1P53798 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Fdft1P53798 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.36□□□□□ -0.59
Fdft1P53798 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Fdft1P53798 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.36□□□□□ -0.59
Fdft1P53798 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Fdft1P53798 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.36□□□□□ -0.59
Fdft1P53798 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Fdft1P53798 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Fdft1P53798 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.36□□□□□ -0.59
Fdft1P53798 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Fdft1P53798 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.36□□□□□ -0.59
Fdft1P53798 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Fdft1P53798 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Fdft1P53798 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms