Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm23272-201ENSMUST00000104053 129 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Gm25076-201ENSMUST00000104098 132 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.23□□□□□ -0.61
Pdx1P52946 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm25492-201ENSMUST00000157383 129 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pdx1P52946 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Pdx1P52946 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.23□□□□□ -0.61
Pdx1P52946 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pdx1P52946 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.23□□□□□ -0.61
Pdx1P52946 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.23□□□□□ -0.61
Pdx1P52946 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.23□□□□□ -0.61
Pdx1P52946 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pdx1P52946 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdx1P52946 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm15881-201ENSMUST00000148792 942 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdx1P52946 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm23694-201ENSMUST00000179335 110 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.22□□□□□ -0.61
Pdx1P52946 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm9132-201ENSMUST00000210182 832 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.22□□□□□ -0.61
Pdx1P52946 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.22□□□□□ -0.61
Pdx1P52946 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.22□□□□□ -0.61
Pdx1P52946 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms