Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rfx3P48381 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.29□□□□□ -0.76
Rfx3P48381 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm24749-201ENSMUST00000157838 343 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm38117-201ENSMUST00000194653 939 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Gm37466-201ENSMUST00000195692 652 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Gm6439-201ENSMUST00000199849 862 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.29□□□□□ -0.76
Rfx3P48381 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Rfx3P48381 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Rfx3P48381 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rfx3P48381 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rfx3P48381 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Rfx3P48381 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm11509-201ENSMUST00000117358 325 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm15711-201ENSMUST00000118889 535 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Gm15207-201ENSMUST00000119259 442 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm4310-201ENSMUST00000177847 889 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rfx3P48381 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.28□□□□□ -0.76
Rfx3P48381 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm18065-201ENSMUST00000221395 526 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rfx3P48381 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.28□□□□□ -0.76
Rfx3P48381 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rfx3P48381 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.28□□□□□ -0.76
Rfx3P48381 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms