Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox18P43680 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox18P43680 AL589696.1-201ENSMUST00000225711 330 ntBASIC11.22□□□□□ -0.61
Sox18P43680 AC116724.1-201ENSMUST00000227900 972 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Olfr584-201ENSMUST00000098210 964 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sox18P43680 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Sox18P43680 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox18P43680 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Sox18P43680 Gm14213-201ENSMUST00000119778 768 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm23884-201ENSMUST00000122687 294 ntBASIC11.21□□□□□ -0.61
Sox18P43680 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox18P43680 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 Gm5700-201ENSMUST00000191483 989 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm37852-201ENSMUST00000193027 350 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Gm43596-201ENSMUST00000202818 884 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm18561-201ENSMUST00000206027 804 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox18P43680 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.21□□□□□ -0.61
Sox18P43680 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 AC133517.2-201ENSMUST00000226820 690 ntBASIC11.21□□□□□ -0.61
Sox18P43680 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Sox18P43680 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox18P43680 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox18P43680 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.21□□□□□ -0.62
Sox18P43680 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.21□□□□□ -0.62
Sox18P43680 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Sox18P43680 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.21□□□□□ -0.62
Sox18P43680 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms