Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Gm7812-201ENSMUST00000203479 874 ntBASIC11.69□□□□□ -0.54
HttP42859 AC156561.1-201ENSMUST00000224774 233 ntBASIC11.69□□□□□ -0.54
HttP42859 CT025547.1-201ENSMUST00000225127 578 ntBASIC11.69□□□□□ -0.54
HttP42859 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HttP42859 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HttP42859 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.69□□□□□ -0.54
HttP42859 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.69□□□□□ -0.54
HttP42859 Gm8806-201ENSMUST00000120076 1407 ntBASIC11.69□□□□□ -0.54
HttP42859 Mir291b-201ENSMUST00000104838 79 ntBASIC11.69□□□□□ -0.54
HttP42859 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC11.69□□□□□ -0.54
HttP42859 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.69□□□□□ -0.54
HttP42859 Gm26931-201ENSMUST00000182273 609 ntBASIC11.69□□□□□ -0.54
HttP42859 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
HttP42859 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HttP42859 Gm26440-201ENSMUST00000082591 129 ntBASIC11.69□□□□□ -0.54
HttP42859 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Gm6141-201ENSMUST00000117181 695 ntBASIC11.68□□□□□ -0.54
HttP42859 Gm4996-201ENSMUST00000122042 784 ntBASIC11.68□□□□□ -0.54
HttP42859 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.68□□□□□ -0.54
HttP42859 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC11.68□□□□□ -0.54
HttP42859 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.68□□□□□ -0.54
HttP42859 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.68□□□□□ -0.54
HttP42859 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Gm38220-201ENSMUST00000195774 1447 ntBASIC11.68□□□□□ -0.54
HttP42859 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.68□□□□□ -0.54
HttP42859 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Gm11951-201ENSMUST00000116005 431 ntBASIC11.68□□□□□ -0.54
HttP42859 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.68□□□□□ -0.54
HttP42859 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC11.68□□□□□ -0.54
HttP42859 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC11.68□□□□□ -0.54
HttP42859 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Gm8796-201ENSMUST00000219122 936 ntBASIC11.68□□□□□ -0.54
HttP42859 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HttP42859 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
HttP42859 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HttP42859 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Mir675-201ENSMUST00000102320 84 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm18859-201ENSMUST00000118792 825 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm14370-201ENSMUST00000122460 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HttP42859 Gm15273-201ENSMUST00000142302 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm7023-201ENSMUST00000147295 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm14357-201ENSMUST00000178352 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm14361-201ENSMUST00000178547 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm14348-201ENSMUST00000179183 868 ntBASIC11.67□□□□□ -0.54
HttP42859 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
HttP42859 Gm7456-201ENSMUST00000182862 1011 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC11.67□□□□□ -0.54
HttP42859 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC11.67□□□□□ -0.54
HttP42859 Gm30652-201ENSMUST00000199103 430 ntBASIC11.67□□□□□ -0.54
HttP42859 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC11.67□□□□□ -0.54
HttP42859 AC108416.3-201ENSMUST00000226148 557 ntBASIC11.67□□□□□ -0.54
HttP42859 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gm6457-201ENSMUST00000066378 815 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms