Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nedd8P29595 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.42□□□□□ -0.74
Nedd8P29595 Gm24196-201ENSMUST00000179161 110 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.42□□□□□ -0.74
Nedd8P29595 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Gm15823-201ENSMUST00000064305 670 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.42□□□□□ -0.74
Nedd8P29595 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.42□□□□□ -0.74
Nedd8P29595 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.41□□□□□ -0.74
Nedd8P29595 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nedd8P29595 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.41□□□□□ -0.74
Nedd8P29595 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nedd8P29595 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nedd8P29595 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm10012-201ENSMUST00000078252 192 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.41□□□□□ -0.74
Nedd8P29595 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nedd8P29595 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.41□□□□□ -0.74
Nedd8P29595 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nedd8P29595 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nedd8P29595 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nedd8P29595 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.4□□□□□ -0.74
Nedd8P29595 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nedd8P29595 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms