Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.73□□□□□ -0.53
Nfkb1P25799 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Nfkb1P25799 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.73□□□□□ -0.53
Nfkb1P25799 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nfkb1P25799 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm14892-201ENSMUST00000117636 267 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm8111-201ENSMUST00000117659 987 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm15374-201ENSMUST00000119313 844 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm11675-201ENSMUST00000121873 832 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm26134-201ENSMUST00000178484 110 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm43163-201ENSMUST00000196571 442 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.72□□□□□ -0.53
Nfkb1P25799 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.72□□□□□ -0.53
Nfkb1P25799 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nfkb1P25799 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nfkb1P25799 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms