Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm14892-201ENSMUST00000117636 267 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm37826-201ENSMUST00000195329 322 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Gm7504-201ENSMUST00000201449 424 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.5□□□□□ -0.41
Pde6bP23440 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Gm25517-201ENSMUST00000083865 134 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.5□□□□□ -0.41
Pde6bP23440 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.49□□□□□ -0.41
Pde6bP23440 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pde6bP23440 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Pde6bP23440 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Gm12247-201ENSMUST00000117585 670 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.49□□□□□ -0.41
Pde6bP23440 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.49□□□□□ -0.41
Pde6bP23440 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Gm42599-201ENSMUST00000201308 469 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pde6bP23440 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.49□□□□□ -0.41
Pde6bP23440 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pde6bP23440 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pde6bP23440 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.48□□□□□ -0.41
Pde6bP23440 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pde6bP23440 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pde6bP23440 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms