Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm22133-201ENSMUST00000102082 109 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
BdnfP21237 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
BdnfP21237 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm37259-201ENSMUST00000193903 849 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.95□□□□□ -0.66
BdnfP21237 Gm7783-201ENSMUST00000204795 781 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Gm13097-201ENSMUST00000210722 397 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.95□□□□□ -0.66
BdnfP21237 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Gm18065-201ENSMUST00000221395 526 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
BdnfP21237 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
BdnfP21237 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.95□□□□□ -0.66
BdnfP21237 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
BdnfP21237 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.94□□□□□ -0.66
BdnfP21237 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
BdnfP21237 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.94□□□□□ -0.66
BdnfP21237 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Gm11660-201ENSMUST00000120955 412 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Gm7584-201ENSMUST00000175829 940 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.94□□□□□ -0.66
BdnfP21237 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Gm5705-201ENSMUST00000066241 711 ntBASIC10.94□□□□□ -0.66
BdnfP21237 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
BdnfP21237 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC10.94□□□□□ -0.66
BdnfP21237 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BdnfP21237 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms