Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Tnfrsf9P20334 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Tnfrsf9P20334 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm13047-201ENSMUST00000117116 815 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm12795-201ENSMUST00000117594 539 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm13315-201ENSMUST00000120376 991 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm7666-201ENSMUST00000146631 819 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm25951-201ENSMUST00000175330 64 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm21489-201ENSMUST00000189668 818 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm37024-201ENSMUST00000192224 868 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm17838-201ENSMUST00000205872 876 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm10076-201ENSMUST00000073238 384 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Tnfrsf9P20334 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tnfrsf9P20334 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms