Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 AC160340.2-201ENSMUST00000220812 3675 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.24□□□□□ -0.93
Sdc1P18828 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm26308-201ENSMUST00000157768 69 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm4271-201ENSMUST00000174444 973 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.24□□□□□ -0.93
Sdc1P18828 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.24□□□□□ -0.93
Sdc1P18828 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.24□□□□□ -0.93
Sdc1P18828 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.24□□□□□ -0.93
Sdc1P18828 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sdc1P18828 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Sdc1P18828 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.23□□□□□ -0.93
Sdc1P18828 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.23□□□□□ -0.93
Sdc1P18828 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.23□□□□□ -0.93
Sdc1P18828 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Sdc1P18828 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Sdc1P18828 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.23□□□□□ -0.93
Sdc1P18828 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sdc1P18828 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.23□□□□□ -0.93
Sdc1P18828 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms