Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.4□□□□□ -0.42
Chmp6P0C0A3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.4□□□□□ -0.42
Chmp6P0C0A3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp6P0C0A3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Btrc-209ENSMUST00000224478 2194 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm11956-201ENSMUST00000119525 512 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm37835-201ENSMUST00000193305 361 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.39□□□□□ -0.43
Chmp6P0C0A3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms